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Home  |  Molecular Tools  |  Oligos  |  B Italian(G)g((A)gdb)0-thal I-PCR
Home  |  Molecular Tools  |  Oligos  |  B Italian(G)g((A)gdb)0-thal I-PCR

Oligo - B Italian(G)g((A)gdb)0-thal I-PCR

Oligo for Inverse PCR amplification assay to define the breakpoint of the deletion Italian(G)g((A)gdb)0-thal. Because the oligos are in inverse direction they cannot generate amplicomers if used on a linear fragment.

CategoryDNA
Creation dateMar 10, 2009
Last revisionFeb 18, 2016
Author(s)Giuseppina Lacerra
Contact
NameGiuseppina Lacerra
AddressInstitute of Genetics and Biophysics A. Buzzati-Traverso - Via Pietro Castellino, 111, 80131 Naples, Italy
Phone+39 081 6132602
Emailgiuseppina.lacerra@igb.cnr.it

Sequence

TCCCCTAAGCTATCAGGTTGATTG

 

Orientationforward
Position5251121-5251144 respect to the Gene Bank sequence NC_000011.10
Length (nt)24
Melting Temperature (°C)59.5
% GC46
Degenerationno
Intended UseIt has been used on a circularized fragment (containing the breakpoint of the new deletion) in association with the oligo “A Italian(G)g((A)gdb)0-thal I-PCR” generating a mutation-specific amplicon of 1200 bp.

 

Quality validation: Yes

Validation info

The oligo "B Italian(G)g((A)gdb)0-thal I-PCR" has been published and used to obtain data published in the peer-reviewed journals reported below.

 

Citations
Lacerra G, Prezioso R, Musollino G, Piluso G, Mastrullo L, De Angioletti M. Identification and molecular characterization of a novel 55-kb deletion recurrent in southern Italy: the Italian (G) γ((A) γδβ)°-thalassemia. Eur J Haematol. 2013 Mar;90(3):214-9. doi: 10.1111/ejh.12066. Epub 2013 Feb 14. PubMed PMID: 23281611.

 

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